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degR [2018-11-23 15:38:59]
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degR [2018-11-23 15:38:59]

regulation of degradative enzyme production
locus
BSU21940
pI
5.16
mw
6.97 kDa
protein length
60 aa Sequence Blast
gene length
180 bp Sequence Blast
function
control of DegU activity
product
positive effector of DegU-phosphate stability
essential
no
synonyms
prtR
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.2|Control of two-component response regulators] → [category|SW 3.4.2.2.3|Control of response regulators/ other]

    • Gene

    Coordinates
    2,308,157 → 2,308,339

    The protein

    [SW|Localization]

  • cytoplasm (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|40BAECB64BAF8ED6C343E484663573A36415E675|degR]
    description
    [Pubmed|3082853]

    sigma factors

  • [protein|7024E4162A6D827069F882FDEACA696EBC05DD40|SigD]: sigma factor, [Pubmed|8550420], in [regulon|7024E4162A6D827069F882FDEACA696EBC05DD40|SigD regulon]
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    Biological materials

    Mutant

  • BKE21940 (Δ[gene|40BAECB64BAF8ED6C343E484663573A36415E675|degR]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE21940 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGCTGCGTTCCCCTTCT, downstream forward: _UP4_TAGGAGAGGCGAATGCCTCT
  • BKK21940 (Δ[gene|40BAECB64BAF8ED6C343E484663573A36415E675|degR]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK21940 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGCTGCGTTCCCCTTCT, downstream forward: _UP4_TAGGAGAGGCGAATGCCTCT

    • References

  • 9335269,1459944,9108277,3098734,8550420,3082853